Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome modulation factor | CC99x_000160 | Not Available | Positive | 37846 - 38037 | 7425.77 |
| atp-binding cassette domain-containing protein | CC99x_000165 | Not Available | Positive | 38365 - 39984 | 60799.5 |
| malonyl-acp o-methyltransferase bioc | CC99x_000170 | Not Available | Negative | 40310 - 41149 | 32189.9 |
| biotin synthase biob | CC99x_000175 | Not Available | Negative | 41139 - 42134 | 36806.4 |
| comf family protein | CC99x_000180 | Not Available | Positive | 42213 - 42923 | 27303.2 |
| hypothetical protein | CC99x_000185 | Not Available | Positive | 42980 - 44434 | 55488.9 |
| dnaj domain-containing protein | CC99x_000190 | Not Available | Positive | 44431 - 44766 | 13056.7 |
| molybdate abc transporter substrate-binding protein | CC99x_000195 | Not Available | Positive | 44889 - 45665 | 29188.0 |
| simpl domain-containing protein | CC99x_000200 | Not Available | Negative | 45880 - 46632 | 27565.0 |
| voc family protein | CC99x_000205 | Not Available | Negative | 46647 - 47093 | 17169.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.