Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_002830 | Not Available | Negative | 636913 - 637638 | 27832.5 |
| triose-phosphate isomerase | CC99x_002835 | Not Available | Positive | 637816 - 638580 | 27429.9 |
| preprotein translocase subunit secg | CC99x_002840 | Not Available | Positive | 638625 - 638987 | 12198.7 |
| Trna-leu | Not Available | Not Available | Positive | 639086 - 639170 | Not Available |
| nadh-quinone oxidoreductase subunit a | CC99x_002850 | Not Available | Positive | 639359 - 639715 | 13648.1 |
| nadh-quinone oxidoreductase subunit b | CC99x_002855 | Not Available | Positive | 639706 - 640191 | 17844.9 |
| nadh-quinone oxidoreductase subunit c | CC99x_002860 | Not Available | Positive | 640188 - 640874 | 26440.6 |
| nadh-quinone oxidoreductase subunit d | CC99x_002865 | Not Available | Positive | 640874 - 642127 | 47906.8 |
| nadh-quinone oxidoreductase subunit nuoe | CC99x_002870 | Not Available | Positive | 642127 - 642630 | 18568.7 |
| nadh-quinone oxidoreductase subunit nuof | CC99x_002875 | Not Available | Positive | 642635 - 643951 | 48415.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.