Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_002780 | Not Available | Negative | 623925 - 624665 | 27560.4 |
| hypothetical protein | CC99x_002785 | Not Available | Positive | 624907 - 626616 | 63226.3 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | CC99x_002790 | Not Available | Positive | 626692 - 627885 | 43698.7 |
| carbamoyl-phosphate synthase large subunit | CC99x_002795 | Not Available | Positive | 627888 - 631172 | 121034.0 |
| transcription elongation factor grea | CC99x_002800 | Not Available | Positive | 631126 - 631605 | 17742.2 |
| yhby family rna-binding protein | CC99x_002805 | Not Available | Negative | 631662 - 631940 | 10566.1 |
| rlme family rna methyltransferase | CC99x_002810 | Not Available | Positive | 632009 - 632644 | 23689.7 |
| atp-dependent zinc metalloprotease ftsh | CC99x_002815 | Not Available | Positive | 632744 - 634678 | 71428.3 |
| dihydropteroate synthase | CC99x_002820 | Not Available | Positive | 634708 - 635574 | 31880.8 |
| phosphoglucosamine mutase | CC99x_002825 | Not Available | Positive | 635567 - 636904 | 48321.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.