Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bame | CC99x_002730 | Not Available | Negative | 613128 - 613475 | 13393.3 |
| ferric iron uptake transcriptional regulator | CC99x_002735 | Not Available | Positive | 613646 - 614068 | 15877.0 |
| dna repair protein recn | CC99x_002740 | Not Available | Negative | 614339 - 616033 | 63410.1 |
| nad(+) kinase | CC99x_002745 | Not Available | Negative | 616042 - 616911 | 32115.9 |
| heat-inducible transcriptional repressor hrca | CC99x_002750 | Not Available | Positive | 617068 - 618108 | 38694.0 |
| nucleotide exchange factor grpe | CC99x_002755 | Not Available | Positive | 618175 - 618828 | 24490.7 |
| molecular chaperone dnak | CC99x_002760 | Not Available | Positive | 618914 - 620851 | 69965.5 |
| molecular chaperone dnaj | CC99x_002765 | Not Available | Positive | 620952 - 622094 | 41198.9 |
| 4-hydroxy-tetrahydrodipicolinate reductase | CC99x_002770 | Not Available | Positive | 622102 - 622905 | 28877.8 |
| hypothetical protein | CC99x_002775 | Not Available | Positive | 623074 - 623667 | 21084.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.