Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_002680 | Not Available | Positive | 604839 - 605012 | 7124.99 |
| hypothetical protein | CC99x_002685 | Not Available | Positive | 605256 - 606500 | 45984.6 |
| gnat family n-acetyltransferase | CC99x_002690 | Not Available | Negative | 606534 - 606989 | 17229.5 |
| sulfide-dependent adenosine diphosphate thiazole synthase | CC99x_002695 | Not Available | Negative | 607272 - 608069 | 28739.5 |
| abc transporter substrate-binding protein | CC99x_002700 | Not Available | Negative | 608092 - 608982 | 33207.4 |
| dual specificity protein phosphatase family protein | CC99x_002705 | Not Available | Negative | 609386 - 610486 | 41694.9 |
| protein kinase | CC99x_002710 | Not Available | Positive | 610643 - 611746 | 41819.4 |
| ssra-binding protein smpb | CC99x_002715 | Not Available | Negative | 611748 - 612215 | 17939.9 |
| type ii toxin-antitoxin system rata family toxin | CC99x_002720 | Not Available | Positive | 612382 - 612810 | 16380.1 |
| rnfh family protein | CC99x_002725 | Not Available | Positive | 612803 - 613156 | 13074.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.