Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_002630 | Not Available | Negative | 595793 - 596509 | 26879.5 |
| gfo/idh/moca family oxidoreductase | CC99x_002635 | Not Available | Negative | 596779 - 597870 | 41096.6 |
| hypothetical protein | CC99x_002640 | Not Available | Negative | 598187 - 599140 | 36642.3 |
| duf924 domain-containing protein | CC99x_002645 | Not Available | Positive | 599563 - 600144 | 22881.4 |
| hypothetical protein | CC99x_002650 | Not Available | Positive | 600177 - 600470 | 11279.6 |
| lysr family transcriptional regulator | CC99x_002655 | Not Available | Negative | 600504 - 601391 | 33019.4 |
| hypothetical protein | CC99x_002660 | Not Available | Positive | 601517 - 601828 | 12071.3 |
| hypothetical protein | CC99x_002665 | Not Available | Positive | 602311 - 603003 | 26235.6 |
| hypothetical protein | CC99x_002670 | Not Available | Positive | 603052 - 604104 | 39730.1 |
| class i sam-dependent methyltransferase | CC99x_002675 | Not Available | Positive | 604134 - 604721 | 22508.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.