Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction-modification system subunit m | CC99x_002570 | Not Available | Negative | 582594 - 584228 | 61753.7 |
| dead/deah box helicase family protein | CC99x_002575 | Not Available | Negative | 584254 - 586812 | 98762.0 |
| type ii toxin-antitoxin system higb family toxin | CC99x_002590 | Not Available | Positive | 588768 - 589052 | 10919.8 |
| imma/irre family metallo-endopeptidase | CC99x_002595 | Not Available | Positive | 589064 - 590278 | 47288.4 |
| beta family protein | CC99x_002600 | Not Available | Positive | 590271 - 591374 | 42488.1 |
| sce7726 family protein | CC99x_002605 | Not Available | Negative | 591319 - 591915 | 23283.2 |
| hypothetical protein | CC99x_002610 | Not Available | Negative | 592051 - 592962 | 34987.0 |
| hypothetical protein | CC99x_002615 | Not Available | Positive | 593224 - 593964 | 28669.9 |
| transposase | CC99x_002620 | Not Available | Positive | 594534 - 594848 | 12091.4 |
| is3 family transposase | CC99x_002625 | Not Available | Positive | 594782 - 595690 | 35518.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.