Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 88): cataattgcaaacgacga | Not Available | Not Available | Positive | 575009 - 575355 | Not Available |
| isl3 family transposase | CC99x_002525 | Not Available | Negative | 575465 - 576640 | 46779.2 |
| hypothetical protein | CC99x_002530 | Not Available | Negative | 576820 - 578016 | 46140.1 |
| hypothetical protein | CC99x_002535 | Not Available | Positive | 578104 - 578373 | 10581.1 |
| hypothetical protein | CC99x_002540 | Not Available | Positive | 578608 - 578898 | 10945.1 |
| type ii toxin-antitoxin system pemk/mazf family toxin | CC99x_002545 | Not Available | Positive | 578902 - 579228 | 12143.9 |
| hypothetical protein | CC99x_002550 | Not Available | Positive | 579293 - 579985 | 25983.3 |
| hypothetical protein | CC99x_002555 | Not Available | Negative | 580329 - 580601 | 10167.9 |
| hypothetical protein | CC99x_002560 | Not Available | Negative | 580759 - 581367 | 22653.9 |
| restriction endonuclease subunit s | CC99x_002565 | Not Available | Negative | 581348 - 582601 | 47096.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.