Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CC99x_002470 | Not Available | Negative | 562430 - 564307 | 70980.2 |
| hypothetical protein | CC99x_002475 | Not Available | Negative | 564312 - 565181 | 32142.4 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | CC99x_002480 | Not Available | Positive | 565491 - 566933 | 53739.8 |
| hypothetical protein | CC99x_002485 | Not Available | Positive | 567114 - 567830 | 26087.7 |
| hypothetical protein | CC99x_002490 | Not Available | Positive | 568154 - 568462 | 10675.7 |
| hypothetical protein | CC99x_002495 | Not Available | Positive | 569042 - 569767 | 25770.1 |
| hypothetical protein | CC99x_002500 | Not Available | Negative | 569844 - 570206 | 13786.3 |
| conjugal transfer protein trax | CC99x_002505 | Not Available | Negative | 570454 - 571239 | 29947.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | CC99x_002510 | Not Available | Negative | 571308 - 572669 | 49660.8 |
| hypothetical protein | CC99x_002515 | Not Available | Positive | 572863 - 574932 | 77253.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.