Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii small subunit | CC99x_002420 | Not Available | Negative | 554537 - 554746 | 7626.05 |
| flagellar motor protein poma | CC99x_002425 | Not Available | Positive | 554986 - 555750 | 27474.5 |
| ompa family protein | CC99x_002430 | Not Available | Positive | 555783 - 556853 | 40071.1 |
| pilz domain-containing protein | CC99x_002435 | Not Available | Positive | 556967 - 557602 | 24137.3 |
| hypothetical protein | CC99x_002440 | Not Available | Positive | 557722 - 558444 | 26620.7 |
| hypothetical protein | CC99x_002445 | Not Available | Positive | 558446 - 558652 | 8192.74 |
| uracil phosphoribosyltransferase | CC99x_002450 | Not Available | Positive | 558665 - 559318 | 24278.8 |
| penicillin-binding protein 2 | CC99x_002455 | Not Available | Negative | 559615 - 561447 | 67068.2 |
| duf4286 family protein | CC99x_002460 | Not Available | Positive | 561482 - 561832 | 13732.7 |
| acyl-coa thioesterase | CC99x_002465 | Not Available | Positive | 561836 - 562246 | 15150.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.