Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine deaminase | CC99x_002370 | Not Available | Negative | 541153 - 542160 | 38653.4 |
| dna mismatch repair protein muts | CC99x_002375 | Not Available | Negative | 542171 - 544771 | 97309.6 |
| recombinase reca | CC99x_002380 | Not Available | Positive | 544902 - 546020 | 40177.5 |
| recombination regulator recx | CC99x_002385 | Not Available | Positive | 546007 - 546441 | 16866.6 |
| alanine--trna ligase | CC99x_002390 | Not Available | Positive | 546489 - 549098 | 95948.5 |
| aspartate kinase | CC99x_002395 | Not Available | Positive | 549228 - 550481 | 45402.0 |
| carbon storage regulator csra | CC99x_002400 | Not Available | Positive | 550554 - 550763 | 7654.18 |
| gtp cyclohydrolase i fole2 | CC99x_002405 | Not Available | Negative | 550874 - 551692 | 30852.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CC99x_002410 | Not Available | Negative | 551721 - 553634 | 69509.1 |
| polyprenyl synthetase family protein | CC99x_002415 | Not Available | Negative | 553635 - 554540 | 32887.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.