Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf494 domain-containing protein | CC99x_000110 | Not Available | Positive | 25852 - 26331 | 18102.0 |
| type i dna topoisomerase | CC99x_000115 | Not Available | Positive | 26372 - 28660 | 86265.2 |
| oxygen-dependent coproporphyrinogen oxidase | CC99x_000120 | Not Available | Positive | 28724 - 29644 | 35014.3 |
| hypothetical protein | CC99x_000125 | Not Available | Positive | 29820 - 31256 | 53252.2 |
| shikimate dehydrogenase | CC99x_000130 | Not Available | Positive | 31351 - 32181 | 30540.7 |
| hypothetical protein | CC99x_000135 | Not Available | Positive | 32184 - 32498 | 11963.2 |
| polysaccharide deacetylase family protein | CC99x_000140 | Not Available | Positive | 32514 - 33221 | 26901.9 |
| gamma carbonic anhydrase family protein | CC99x_000145 | Not Available | Negative | 33483 - 34022 | 19544.5 |
| glutathione-disulfide reductase | CC99x_000150 | Not Available | Negative | 34055 - 35401 | 48841.2 |
| m3 family metallopeptidase | CC99x_000155 | Not Available | Positive | 35497 - 37539 | 78080.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.