Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 508602 - 508698 | Not Available |
| dna polymerase iii subunit gamma/tau | CC99x_002275 | Not Available | Positive | 508820 - 510511 | 62745.6 |
| ybab/ebfc family nucleoid-associated protein | CC99x_002280 | Not Available | Positive | 510520 - 510882 | 13341.4 |
| recombination mediator recr | CC99x_002285 | Not Available | Positive | 510900 - 511493 | 21732.6 |
| molecular chaperone htpg | CC99x_002290 | Not Available | Positive | 511985 - 513910 | 73833.0 |
| spor domain-containing protein | CC99x_002295 | Not Available | Positive | 513948 - 514976 | 37105.3 |
| hypothetical protein | CC99x_002300 | Not Available | Negative | 515339 - 515647 | 11774.4 |
| type ii toxin-antitoxin system rele/pare family toxin | CC99x_002305 | Not Available | Negative | 515640 - 516044 | 16107.1 |
| ankyrin repeat domain-containing protein | CC99x_002310 | Not Available | Negative | 516297 - 519320 | 113439.0 |
| m48 family metalloprotease | CC99x_002315 | Not Available | Negative | 519479 - 520576 | 40843.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.