Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | CC99x_002220 | Not Available | Positive | 500323 - 501441 | 42729.1 |
| glycosyltransferase family 4 protein | CC99x_002225 | Not Available | Positive | 501438 - 502598 | 44785.3 |
| glycosyltransferase | CC99x_002230 | Not Available | Positive | 502595 - 503362 | 29278.6 |
| nad-dependent epimerase/dehydratase family protein | CC99x_002235 | Not Available | Positive | 503365 - 504333 | 36942.1 |
| hypothetical protein | CC99x_002240 | Not Available | Negative | 504356 - 504613 | 9266.94 |
| hypothetical protein | CC99x_002245 | Not Available | Positive | 504905 - 505111 | 7391.6 |
| is3 family transposase | CC99x_002250 | Not Available | Negative | 505069 - 505977 | 35518.2 |
| transposase | CC99x_002255 | Not Available | Negative | 505911 - 506225 | 12091.4 |
| hypothetical protein | CC99x_002260 | Not Available | Positive | 506263 - 507597 | 49990.2 |
| glycosyltransferase | CC99x_002265 | Not Available | Positive | 507635 - 508537 | 34204.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.