Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CC99x_002170 | Not Available | Positive | 490168 - 490971 | 31226.4 |
| udp-glucose/gdp-mannose dehydrogenase family protein | CC99x_002175 | Not Available | Positive | 490986 - 492323 | 49315.2 |
| glycosyltransferase | CC99x_002180 | Not Available | Positive | 492746 - 493519 | 29071.3 |
| fkbm family methyltransferase | CC99x_002185 | Not Available | Positive | 493523 - 494296 | 29154.3 |
| yqha family protein | CC99x_002190 | Not Available | Negative | 494966 - 495520 | 20912.6 |
| sgnh/gdsl hydrolase family protein | CC99x_002195 | Not Available | Negative | 495552 - 496493 | 35870.9 |
| hypothetical protein | CC99x_002200 | Not Available | Negative | 496514 - 496666 | 5769.46 |
| hypothetical protein | CC99x_002205 | Not Available | Negative | 496666 - 497070 | 15614.6 |
| carbamoyltransferase | CC99x_002210 | Not Available | Negative | 497107 - 498948 | 69468.5 |
| class i sam-dependent methyltransferase | CC99x_002215 | Not Available | Positive | 499298 - 500374 | 41815.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.