Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | CC99x_002120 | Not Available | Positive | 481380 - 482348 | 36445.5 |
| alpha-2,8-polysialyltransferase family protein | CC99x_002125 | Not Available | Positive | 482351 - 483325 | 37295.5 |
| class i sam-dependent methyltransferase | CC99x_002130 | Not Available | Positive | 483370 - 484053 | 26572.5 |
| glycosyltransferase | CC99x_002135 | Not Available | Positive | 484060 - 484980 | 34647.8 |
| hypothetical protein | CC99x_002140 | Not Available | Positive | 484988 - 485989 | 39352.9 |
| fdta/qdta family cupin domain-containing protein | CC99x_002145 | Not Available | Positive | 485952 - 486314 | 13719.3 |
| degt/dnrj/eryc1/strs family aminotransferase | CC99x_002150 | Not Available | Positive | 486311 - 487405 | 40981.3 |
| glucose-1-phosphate thymidylyltransferase rfba | CC99x_002155 | Not Available | Positive | 487402 - 488280 | 32869.6 |
| dtdp-glucose 4,6-dehydratase | CC99x_002160 | Not Available | Positive | 488274 - 489284 | 38341.1 |
| methyltransferase, tigr04325 family | CC99x_002165 | Not Available | Positive | 489302 - 490126 | 31144.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.