Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CC99x_002070 | Not Available | Negative | 469076 - 470122 | 39817.4 |
| hypothetical protein | CC99x_002075 | Not Available | Negative | 470092 - 470814 | 27302.8 |
| glycosyltransferase | CC99x_002080 | Not Available | Negative | 470798 - 472171 | 52525.5 |
| n-acetylneuraminate synthase family protein | CC99x_002085 | Not Available | Negative | 472182 - 472886 | 26602.8 |
| asparagine synthase (glutamine-hydrolyzing) | CC99x_002090 | Not Available | Negative | 472861 - 474702 | 70434.8 |
| abc transporter atp-binding protein/permease | CC99x_002095 | Not Available | Positive | 475003 - 476793 | 67032.7 |
| degt/dnrj/eryc1/strs family aminotransferase | CC99x_002100 | Not Available | Positive | 476869 - 478158 | 47647.4 |
| n-acetyl sugar amidotransferase | CC99x_002105 | Not Available | Positive | 478160 - 479368 | 46233.9 |
| n-acetyl sugar amidotransferase | CC99x_002110 | Not Available | Positive | 479368 - 480639 | 49033.8 |
| glycosyltransferase family protein | CC99x_002115 | Not Available | Positive | 480632 - 481378 | 28053.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.