Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CC99x_002020 | Not Available | Positive | 457269 - 458138 | 33707.3 |
| hypothetical protein | CC99x_002025 | Not Available | Negative | 458147 - 460072 | 73246.9 |
| sulfotransferase | CC99x_002030 | Not Available | Negative | 460078 - 461442 | 53525.2 |
| class i sam-dependent methyltransferase | CC99x_002035 | Not Available | Negative | 461544 - 462314 | 29932.8 |
| gnat family n-acetyltransferase | CC99x_002040 | Not Available | Negative | 462614 - 463159 | 20899.5 |
| phosphocholine cytidylyltransferase family protein | CC99x_002045 | Not Available | Negative | 463162 - 463926 | 29119.9 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | CC99x_002050 | Not Available | Negative | 463932 - 464576 | 24114.2 |
| hypothetical protein | CC99x_002055 | Not Available | Negative | 464573 - 467530 | 112081.0 |
| imidazole glycerol phosphate synthase cyclase subunit | CC99x_002060 | Not Available | Negative | 467710 - 468462 | 27713.3 |
| imidazole glycerol phosphate synthase subunit hish | CC99x_002065 | Not Available | Negative | 468456 - 469079 | 23049.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.