Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein kinase | CC99x_001970 | Not Available | Positive | 446853 - 448232 | 52576.7 |
| duf4401 domain-containing protein | CC99x_001975 | Not Available | Negative | 448366 - 449439 | 40314.2 |
| hypothetical protein | CC99x_001980 | Not Available | Negative | 449436 - 449867 | 16399.5 |
| dna starvation/stationary phase protection protein | CC99x_001985 | Not Available | Positive | 449987 - 450415 | 16159.2 |
| hypothetical protein | CC99x_001990 | Not Available | Negative | 450568 - 451308 | 26866.1 |
| gdp-mannose 4,6-dehydratase | CC99x_001995 | Not Available | Positive | 451545 - 452636 | 41191.4 |
| putative dna binding domain-containing protein | CC99x_002000 | Not Available | Positive | 452851 - 454200 | 51097.1 |
| gdp-l-fucose synthase | CC99x_002005 | Not Available | Positive | 454268 - 455269 | 37223.9 |
| hypothetical protein | CC99x_002010 | Not Available | Positive | 455283 - 456656 | 53616.9 |
| adenylyl-sulfate kinase | CC99x_002015 | Not Available | Negative | 456690 - 457187 | 18811.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.