Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | CC99x_001920 | Not Available | Positive | 435973 - 437316 | 49585.2 |
| duf2309 domain-containing protein | CC99x_001925 | Not Available | Positive | 437324 - 439543 | 82983.1 |
| duf393 domain-containing protein | CC99x_001930 | Not Available | Negative | 439612 - 440067 | 17475.3 |
| glutathione peroxidase | CC99x_001935 | Not Available | Positive | 440631 - 441200 | 21402.9 |
| cryptochrome/photolyase family protein | CC99x_001940 | Not Available | Positive | 441197 - 442732 | 59455.5 |
| fad-dependent oxidoreductase | CC99x_001945 | Not Available | Negative | 442952 - 443935 | 37386.5 |
| Trna-ser | Not Available | Not Available | Positive | 444481 - 444570 | Not Available |
| tpm domain-containing protein | CC99x_001955 | Not Available | Negative | 444708 - 445343 | 23980.4 |
| m50 family metallopeptidase | CC99x_001960 | Not Available | Negative | 445447 - 446142 | 26478.5 |
| hypothetical protein | CC99x_001965 | Not Available | Negative | 446237 - 446461 | 6979.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.