Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CC99x_001870 | Not Available | Positive | 427390 - 427926 | 20665.2 |
| pas domain-containing protein | CC99x_001875 | Not Available | Positive | 428133 - 428732 | 22740.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | CC99x_001880 | Not Available | Positive | 428719 - 429828 | 41646.4 |
| duf2254 domain-containing protein | CC99x_001885 | Not Available | Positive | 429949 - 431208 | 46281.8 |
| mfs transporter | CC99x_001890 | Not Available | Positive | 431637 - 432923 | 46948.6 |
| carboxymuconolactone decarboxylase family protein | CC99x_001895 | Not Available | Negative | 432987 - 433331 | 12213.8 |
| rhodanese-like domain-containing protein | CC99x_001900 | Not Available | Negative | 433366 - 433962 | 21554.6 |
| metalloregulator arsr/smtb family transcription factor | CC99x_001905 | Not Available | Positive | 434082 - 434387 | 11355.8 |
| tryptophan-rich sensory protein | CC99x_001910 | Not Available | Negative | 434435 - 434917 | 18637.5 |
| lysr family transcriptional regulator | CC99x_001915 | Not Available | Negative | 435028 - 435870 | 31283.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.