Candidatus Berkiella cookevillensis

CoccusMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Candidatus Berkiellales

Family

Candidatus Berkiellaceae

Genus

Candidatus Berkiella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCandidatus Berkiellales
FamilyCandidatus Berkiellaceae
GenusCandidatus Berkiella
SpeciesCandidatus Berkiella cookevillensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbiofilm sample from a cooling tower
Biotic relationshipNot Available
Host(s)Amoeba, Acanthamoeba polyphaga
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Berkiella cookevillensis strain CC99 CC99_02, whole

Gene Summary

Adenine Count

924980 bp

Thymine Count

927602 bp

Guanine Count

565100 bp

Cytosine Count

567154 bp

Genome Length

2984836 bp

Protein-coding Genes

2513 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heat repeat domain-containing proteinCC99x_000060Not AvailableNegative15189 - 1616337781.4
bacteriocinCC99x_000065Not AvailableNegative16357 - 165457023.35
phosphatase pap2 family proteinCC99x_000070Not AvailablePositive16890 - 1776532866.6
trkh family potassium uptake proteinCC99x_000075Not AvailableNegative17742 - 1919354024.3
trk system potassium transporter trkaCC99x_000080Not AvailableNegative19200 - 2057350045.7
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbCC99x_000085Not AvailableNegative20618 - 2191948659.1
methionyl-trna formyltransferaseCC99x_000090Not AvailableNegative21926 - 2285534585.2
peptide deformylaseCC99x_000095Not AvailableNegative22885 - 2338218443.5
lysm peptidoglycan-binding domain-containing proteinCC99x_000100Not AvailablePositive23525 - 2461340662.0
dna-processing protein dpraCC99x_000105Not AvailablePositive24668 - 2584643091.2

Displaying genes 31 – 40 of 2571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.