Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | CC99x_001820 | Not Available | Negative | 417332 - 418204 | 32640.9 |
| high-affinity branched-chain amino acid abc transporter permease livm | CC99x_001825 | Not Available | Negative | 418197 - 419468 | 46621.7 |
| branched-chain amino acid abc transporter permease | CC99x_001830 | Not Available | Negative | 419474 - 420391 | 32728.7 |
| branched-chain amino acid abc transporter substrate-binding protein | CC99x_001835 | Not Available | Negative | 420401 - 421534 | 41208.7 |
| had family acid phosphatase | CC99x_001840 | Not Available | Negative | 421564 - 422253 | 26063.1 |
| hypothetical protein | CC99x_001845 | Not Available | Negative | 422267 - 423025 | 28877.4 |
| abc transporter atp-binding protein | CC99x_001850 | Not Available | Positive | 423233 - 424153 | 34149.7 |
| abc transporter permease | CC99x_001855 | Not Available | Positive | 424150 - 424920 | 28928.3 |
| hypothetical protein | CC99x_001860 | Not Available | Negative | 425027 - 425332 | 11621.0 |
| branched-chain amino acid transport system ii carrier protein | CC99x_001865 | Not Available | Positive | 426236 - 427393 | 42649.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.