Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | CC99x_001770 | Not Available | Negative | 409351 - 410490 | 41771.3 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | CC99x_001775 | Not Available | Positive | 410783 - 411862 | 40276.9 |
| alpha-ketoacid dehydrogenase subunit beta | CC99x_001780 | Not Available | Positive | 411859 - 412839 | 35312.8 |
| 2-oxo acid dehydrogenase subunit e2 | CC99x_001785 | Not Available | Positive | 412836 - 413930 | 39001.3 |
| doxx family protein | CC99x_001790 | Not Available | Negative | 413990 - 414454 | 17672.0 |
| hypothetical protein | CC99x_001795 | Not Available | Positive | 414650 - 414952 | 11242.1 |
| hypothetical protein | CC99x_001800 | Not Available | Positive | 415243 - 415563 | 10222.6 |
| hypothetical protein | CC99x_001805 | Not Available | Positive | 415926 - 416195 | 8910.21 |
| hypothetical protein | CC99x_001810 | Not Available | Positive | 416332 - 416550 | 8190.87 |
| abc transporter atp-binding protein | CC99x_001815 | Not Available | Negative | 416577 - 417311 | 26702.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.