Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine 4-monooxygenase | CC99x_001720 | Not Available | Negative | 398018 - 398824 | 31126.5 |
| 3-oxoacid coa-transferase subunit b | CC99x_001725 | Not Available | Negative | 398840 - 399499 | 23477.6 |
| coa transferase subunit a | CC99x_001730 | Not Available | Negative | 399525 - 400223 | 25333.0 |
| hydroxymethylglutaryl-coa lyase | CC99x_001735 | Not Available | Negative | 400251 - 401150 | 32094.0 |
| atp-grasp domain-containing protein | CC99x_001740 | Not Available | Negative | 401150 - 403126 | 73943.9 |
| enoyl-coa hydratase/isomerase family protein | CC99x_001745 | Not Available | Negative | 403119 - 403916 | 29283.3 |
| methylcrotonoyl-coa carboxylase | CC99x_001750 | Not Available | Negative | 403913 - 405520 | 58268.4 |
| acetyl-coa c-acyltransferase | CC99x_001755 | Not Available | Negative | 405524 - 406717 | 41964.2 |
| isovaleryl-coa dehydrogenase | CC99x_001760 | Not Available | Negative | 406930 - 408087 | 41904.4 |
| sdr family nad(p)-dependent oxidoreductase | CC99x_001765 | Not Available | Positive | 408353 - 409108 | 26796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.