Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter | CC99x_001670 | Not Available | Positive | 385633 - 386634 | 35434.4 |
| efflux rnd transporter periplasmic adaptor subunit | CC99x_001675 | Not Available | Positive | 386831 - 388000 | 42372.2 |
| efflux rnd transporter permease subunit | CC99x_001680 | Not Available | Positive | 388000 - 391116 | 112575.0 |
| nudix domain-containing protein | CC99x_001685 | Not Available | Negative | 391458 - 391931 | 18082.5 |
| maleylacetoacetate isomerase | CC99x_001690 | Not Available | Negative | 391941 - 392591 | 24654.6 |
| fumarylacetoacetate hydrolase family protein | CC99x_001695 | Not Available | Negative | 392754 - 393746 | 36448.4 |
| 4-hydroxyphenylpyruvate dioxygenase | CC99x_001700 | Not Available | Negative | 393761 - 394846 | 41365.9 |
| tryptophan/tyrosine permease | CC99x_001705 | Not Available | Positive | 395051 - 396325 | 46357.0 |
| histidinol-phosphate transaminase | CC99x_001710 | Not Available | Positive | 396353 - 397468 | 42023.2 |
| 4a-hydroxytetrahydrobiopterin dehydratase | CC99x_001715 | Not Available | Positive | 397462 - 397803 | 12742.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.