Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | CC99x_001620 | Not Available | Positive | 373796 - 374449 | 23888.3 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | CC99x_001625 | Not Available | Positive | 374451 - 375254 | 28953.4 |
| terc family protein | CC99x_001630 | Not Available | Positive | 375410 - 376387 | 37040.6 |
| duf2062 domain-containing protein | CC99x_001635 | Not Available | Positive | 376430 - 377002 | 22426.8 |
| hemolysin family protein | CC99x_001640 | Not Available | Positive | 377027 - 378367 | 51136.6 |
| threonine/serine dehydratase | CC99x_001645 | Not Available | Negative | 378453 - 379454 | 35867.5 |
| hypothetical protein | CC99x_001650 | Not Available | Positive | 379996 - 382236 | 84122.3 |
| hypothetical protein | CC99x_001655 | Not Available | Positive | 382470 - 383873 | 52699.3 |
| hypothetical protein | CC99x_001660 | Not Available | Positive | 384030 - 384719 | 26174.9 |
| duf47 family protein | CC99x_001665 | Not Available | Positive | 384956 - 385594 | 24622.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.