Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | CC99x_001570 | Not Available | Negative | 361463 - 362623 | 42296.9 |
| pyridoxal-phosphate dependent enzyme | CC99x_001575 | Not Available | Negative | 362616 - 363989 | 50398.0 |
| hypothetical protein | CC99x_001580 | Not Available | Negative | 364096 - 365508 | 52798.7 |
| nad+ synthase | CC99x_001585 | Not Available | Negative | 365581 - 367266 | 62558.3 |
| nicotinate phosphoribosyltransferase | CC99x_001590 | Not Available | Negative | 367263 - 368441 | 44896.5 |
| nicotinamidase | CC99x_001595 | Not Available | Negative | 368438 - 369091 | 23956.8 |
| adenylyltransferase/cytidyltransferase family protein | CC99x_001600 | Not Available | Positive | 369222 - 369800 | 22250.5 |
| hypothetical protein | CC99x_001605 | Not Available | Positive | 369808 - 370479 | 25627.0 |
| bifunctional glycosyltransferase family 2/gtra family protein | CC99x_001610 | Not Available | Negative | 371022 - 372071 | 39121.1 |
| hypothetical protein | CC99x_001615 | Not Available | Negative | 372053 - 373438 | 53566.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.