Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | CC99x_001520 | Not Available | Negative | 351134 - 352549 | 53511.1 |
| hypothetical protein | CC99x_001525 | Not Available | Negative | 352640 - 353185 | 20359.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CC99x_001530 | Not Available | Positive | 353428 - 354309 | 31636.8 |
| hypothetical protein | CC99x_001535 | Not Available | Positive | 354299 - 354556 | 9589.67 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | CC99x_001540 | Not Available | Positive | 354583 - 355299 | 27529.4 |
| hypothetical protein | CC99x_001545 | Not Available | Positive | 355445 - 356461 | 39318.4 |
| hypothetical protein | CC99x_001550 | Not Available | Positive | 356753 - 357412 | 23626.8 |
| hypothetical protein | CC99x_001555 | Not Available | Positive | 357429 - 357842 | 15468.7 |
| hypothetical protein | CC99x_001560 | Not Available | Positive | 357924 - 359630 | 62624.4 |
| duf885 domain-containing protein | CC99x_001565 | Not Available | Negative | 359661 - 361346 | 64208.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.