Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_001470 | Not Available | Negative | 337612 - 340119 | 92160.7 |
| hypothetical protein | CC99x_001475 | Not Available | Negative | 340323 - 341624 | 47569.2 |
| hypothetical protein | CC99x_001480 | Not Available | Negative | 341794 - 342462 | 25340.3 |
| hypothetical protein | CC99x_001485 | Not Available | Positive | 342724 - 344775 | 80444.7 |
| amino acid permease | CC99x_001490 | Not Available | Negative | 344999 - 346402 | 51596.1 |
| transposase | CC99x_001495 | Not Available | Negative | 346618 - 346893 | 10400.6 |
| gnat family n-acetyltransferase | CC99x_001500 | Not Available | Positive | 347016 - 347462 | 17567.4 |
| hypothetical protein | CC99x_001505 | Not Available | Positive | 347577 - 348134 | 19982.9 |
| m48 family metalloprotease | CC99x_001510 | Not Available | Negative | 348445 - 349938 | 55093.5 |
| ai-2e family transporter | CC99x_001515 | Not Available | Positive | 350018 - 351070 | 39496.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.