Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2065 domain-containing protein | CC99x_001420 | Not Available | Positive | 328928 - 329122 | 7344.44 |
| adenylosuccinate synthase | CC99x_001425 | Not Available | Positive | 329161 - 330459 | 47830.7 |
| Trna-leu | Not Available | Not Available | Positive | 330598 - 330684 | Not Available |
| ribonuclease r | CC99x_001435 | Not Available | Positive | 330718 - 333075 | 89341.5 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | CC99x_001440 | Not Available | Positive | 333068 - 333799 | 26345.2 |
| 30s ribosomal protein s6 | CC99x_001445 | Not Available | Positive | 333971 - 334327 | 13886.8 |
| 30s ribosomal protein s18 | CC99x_001450 | Not Available | Positive | 334342 - 334581 | 9485.79 |
| 50s ribosomal protein l9 | CC99x_001455 | Not Available | Positive | 334629 - 335081 | 16521.1 |
| replicative dna helicase | CC99x_001460 | Not Available | Positive | 335136 - 336527 | 51088.1 |
| alanine racemase | CC99x_001465 | Not Available | Positive | 336517 - 337596 | 39905.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.