Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | CC99x_001270 | Not Available | Negative | 294459 - 295205 | 29265.9 |
| glycosyltransferase family 2 protein | CC99x_001275 | Not Available | Negative | 295202 - 295954 | 28483.8 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | CC99x_001280 | Not Available | Positive | 296087 - 297385 | 49099.5 |
| hypothetical protein | CC99x_001285 | Not Available | Positive | 297486 - 298274 | 28768.8 |
| protein kinase | CC99x_001290 | Not Available | Negative | 298275 - 300392 | 77275.2 |
| tolc family outer membrane protein | CC99x_001295 | Not Available | Negative | 300601 - 301899 | 47972.7 |
| protein-l-isoaspartate o-methyltransferase | CC99x_001300 | Not Available | Negative | 301910 - 302569 | 24205.3 |
| nudix domain-containing protein | CC99x_001305 | Not Available | Positive | 302735 - 303364 | 24028.7 |
| duf1249 domain-containing protein | CC99x_001310 | Not Available | Positive | 303357 - 303782 | 16525.1 |
| dna topoisomerase iv subunit b | CC99x_001315 | Not Available | Positive | 303801 - 305696 | 69975.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.