Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide heptosyltransferase i | CC99x_001220 | Not Available | Positive | 284333 - 285388 | 39374.9 |
| o-antigen ligase family protein | CC99x_001225 | Not Available | Positive | 285381 - 286628 | 47490.3 |
| glycosyltransferase family 2 protein | CC99x_001230 | Not Available | Positive | 286625 - 287449 | 31589.9 |
| lipopolysaccharide kinase inaa family protein | CC99x_001235 | Not Available | Positive | 287446 - 288141 | 26992.9 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | CC99x_001240 | Not Available | Positive | 288157 - 289614 | 53052.0 |
| adp-glyceromanno-heptose 6-epimerase | CC99x_001245 | Not Available | Positive | 289611 - 290561 | 35896.4 |
| hypothetical protein | CC99x_001250 | Not Available | Positive | 290565 - 290789 | 8262.97 |
| ankyrin repeat domain-containing protein | CC99x_001255 | Not Available | Negative | 290793 - 291371 | 21632.2 |
| hypothetical protein | CC99x_001260 | Not Available | Negative | 291602 - 292390 | 29901.1 |
| hypothetical protein | CC99x_001265 | Not Available | Positive | 292603 - 294507 | 73197.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.