Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine decarboxylase | CC99x_001170 | Not Available | Positive | 271774 - 272580 | 30484.4 |
| pilt/pilu family type 4a pilus atpase | CC99x_001175 | Not Available | Negative | 272577 - 273743 | 43505.8 |
| spfh/band 7/phb domain protein | CC99x_001180 | Not Available | Positive | 273911 - 274831 | 33812.4 |
| nfed family protein | CC99x_001185 | Not Available | Positive | 274836 - 275288 | 17103.3 |
| bifunctional | CC99x_001190 | Not Available | Positive | 275289 - 278135 | 109397.0 |
| protein kinase | CC99x_001195 | Not Available | Negative | 278132 - 280510 | 89371.8 |
| hypothetical protein | CC99x_001200 | Not Available | Negative | 280752 - 281768 | 39456.8 |
| branched-chain amino acid transaminase | CC99x_001205 | Not Available | Positive | 282002 - 282922 | 34542.2 |
| zinc-finger domain-containing protein | CC99x_001210 | Not Available | Positive | 283071 - 283280 | 7767.33 |
| lipopolysaccharide heptosyltransferase ii | CC99x_001215 | Not Available | Positive | 283362 - 284330 | 36446.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.