Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_012850 | Not Available | Positive | 2967899 - 2968588 | 27046.4 |
| hypothetical protein | CC99x_012855 | Not Available | Positive | 2968600 - 2970471 | 70278.1 |
| catalase/peroxidase hpi | CC99x_012860 | Not Available | Negative | 2970583 - 2972805 | 81387.8 |
| helix-turn-helix transcriptional regulator | CC99x_012865 | Not Available | Positive | 2973668 - 2974006 | 12546.4 |
| type ii toxin-antitoxin system hipa family toxin | CC99x_012870 | Not Available | Positive | 2973996 - 2975264 | 47498.7 |
| j domain-containing protein | CC99x_012875 | Not Available | Negative | 2975427 - 2976485 | 41012.3 |
| hypothetical protein | CC99x_012880 | Not Available | Positive | 2976717 - 2976953 | 8920.56 |
| hypothetical protein | CC99x_012885 | Not Available | Positive | 2977035 - 2983208 | 234126.0 |
| hypothetical protein | CC99x_012890 | Not Available | Positive | 2983175 - 2983498 | 12519.1 |
| hypothetical protein | CC99x_012895 | Not Available | Positive | 2983520 - 2983831 | 12370.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.