Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | CC99x_012750 | Not Available | Positive | 2944320 - 2945318 | 37480.9 |
| parb n-terminal domain-containing protein | CC99x_012755 | Not Available | Positive | 2945306 - 2946448 | 42884.9 |
| hypothetical protein | CC99x_012760 | Not Available | Positive | 2946451 - 2946858 | 15501.2 |
| afg1 family atpase | CC99x_012765 | Not Available | Positive | 2946862 - 2947944 | 42626.8 |
| mechanosensitive ion channel family protein | CC99x_012770 | Not Available | Positive | 2947964 - 2948791 | 31762.4 |
| doti/icml family type iv secretion protein | CC99x_012775 | Not Available | Positive | 2949116 - 2949736 | 23481.7 |
| hypothetical protein | CC99x_012780 | Not Available | Negative | 2949760 - 2951223 | 53928.3 |
| rimk family alpha-l-glutamate ligase | CC99x_012785 | Not Available | Positive | 2951621 - 2953003 | 51234.7 |
| hypothetical protein | CC99x_012790 | Not Available | Positive | 2953143 - 2953901 | 28802.7 |
| hypothetical protein | CC99x_012795 | Not Available | Positive | 2954053 - 2955189 | 43229.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.