Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | CC99x_012700 | Not Available | Negative | 2933746 - 2934165 | 15858.8 |
| gnat family n-acetyltransferase | CC99x_012705 | Not Available | Negative | 2934405 - 2934923 | 19932.8 |
| porphobilinogen synthase | CC99x_012710 | Not Available | Negative | 2934933 - 2935943 | 37102.5 |
| peroxiredoxin | CC99x_012715 | Not Available | Negative | 2936065 - 2936541 | 18396.2 |
| hypothetical protein | CC99x_012720 | Not Available | Negative | 2936667 - 2936900 | 8100.89 |
| prolyl oligopeptidase family serine peptidase | CC99x_012725 | Not Available | Positive | 2937044 - 2938897 | 69761.6 |
| multidrug effflux mfs transporter | CC99x_012730 | Not Available | Negative | 2939476 - 2940660 | 43599.6 |
| protein kinase | CC99x_012735 | Not Available | Negative | 2940680 - 2941393 | 28110.5 |
| hypothetical protein | CC99x_012740 | Not Available | Negative | 2941759 - 2942517 | 29734.1 |
| hypothetical protein | CC99x_012745 | Not Available | Negative | 2943868 - 2944026 | 5877.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.