Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_012650 | Not Available | Negative | 2924515 - 2924943 | 16975.4 |
| duf938 domain-containing protein | CC99x_012655 | Not Available | Negative | 2925013 - 2925606 | 22714.4 |
| fatty acid desaturase | CC99x_012660 | Not Available | Positive | 2925992 - 2927077 | 41833.2 |
| gnat family n-acetyltransferase | CC99x_012665 | Not Available | Negative | 2927153 - 2928379 | 46255.1 |
| adenosine deaminase | CC99x_012670 | Not Available | Negative | 2928468 - 2929616 | 43349.0 |
| hypothetical protein | CC99x_012675 | Not Available | Negative | 2930564 - 2930743 | 6142.37 |
| hypothetical protein | CC99x_012680 | Not Available | Negative | 2931036 - 2931656 | 23860.7 |
| transposase | CC99x_012685 | Not Available | Positive | 2931731 - 2932045 | 12091.4 |
| is3 family transposase | CC99x_012690 | Not Available | Positive | 2931979 - 2932887 | 35518.2 |
| large-conductance mechanosensitive channel protein mscl | CC99x_012695 | Not Available | Negative | 2933222 - 2933629 | 14699.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.