Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | CC99x_012600 | Not Available | Positive | 2916269 - 2917177 | 35518.2 |
| hypothetical protein | CC99x_012605 | Not Available | Positive | 2917598 - 2917897 | 10401.4 |
| res family nad+ phosphorylase | CC99x_012610 | Not Available | Negative | 2918001 - 2918774 | 30167.8 |
| xre family transcriptional regulator | CC99x_012615 | Not Available | Negative | 2918777 - 2919151 | 13942.7 |
| gnat family n-acetyltransferase | CC99x_012620 | Not Available | Negative | 2919360 - 2919686 | 12431.4 |
| hypothetical protein | CC99x_012625 | Not Available | Negative | 2919690 - 2920244 | 21173.7 |
| ydiu family protein | CC99x_012630 | Not Available | Negative | 2920611 - 2922065 | 54806.7 |
| transcription elongation factor greb | CC99x_012635 | Not Available | Negative | 2922238 - 2922762 | 19721.6 |
| nucleoside triphosphate pyrophosphohydrolase family protein | CC99x_012640 | Not Available | Negative | 2922778 - 2923251 | 17681.2 |
| signal peptidase i | CC99x_012645 | Not Available | Negative | 2923467 - 2924210 | 28702.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.