Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CC99x_012550 | Not Available | Negative | 2906952 - 2907593 | 24115.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | CC99x_012555 | Not Available | Negative | 2907577 - 2909541 | 72908.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CC99x_012560 | Not Available | Negative | 2909544 - 2910875 | 47996.3 |
| membrane protein insertase yidc | CC99x_012565 | Not Available | Negative | 2910877 - 2912550 | 63706.5 |
| membrane protein insertion efficiency factor yidd | CC99x_012570 | Not Available | Negative | 2912562 - 2912792 | 8692.68 |
| ribonuclease p protein component | CC99x_012575 | Not Available | Negative | 2912756 - 2913145 | 15158.8 |
| 50s ribosomal protein l34 | CC99x_012580 | Not Available | Negative | 2913161 - 2913316 | 6109.79 |
| hypothetical protein | CC99x_012585 | Not Available | Positive | 2914758 - 2915543 | 29096.2 |
| hypothetical protein | CC99x_012590 | Not Available | Negative | 2915550 - 2915942 | 15278.5 |
| transposase | CC99x_012595 | Not Available | Positive | 2916021 - 2916335 | 12091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.