Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit i | CC99x_001120 | Not Available | Positive | 262212 - 263651 | 54465.3 |
| cytochrome-c oxidase, cbb3-type subunit ii | CC99x_001125 | Not Available | Positive | 263662 - 264273 | 23208.2 |
| cbb3-type cytochrome c oxidase subunit 3 | CC99x_001130 | Not Available | Positive | 264273 - 264449 | 6537.11 |
| cytochrome-c oxidase, cbb3-type subunit iii | CC99x_001135 | Not Available | Positive | 264446 - 265348 | 33821.9 |
| cytochrome c oxidase accessory protein ccog | CC99x_001140 | Not Available | Positive | 265354 - 266763 | 54443.6 |
| fixh family protein | CC99x_001145 | Not Available | Positive | 266769 - 266978 | 8179.85 |
| cadmium-translocating p-type atpase | CC99x_001150 | Not Available | Positive | 266975 - 269398 | 90117.3 |
| cbb3-type cytochrome oxidase assembly protein ccos | CC99x_001155 | Not Available | Positive | 269418 - 269594 | 6994.63 |
| sulfite exporter taue/safe family protein | CC99x_001160 | Not Available | Positive | 269587 - 270288 | 24759.7 |
| hypothetical protein | CC99x_001165 | Not Available | Positive | 270373 - 271389 | 39269.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.