Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | CC99x_012450 | Not Available | Positive | 2885774 - 2886718 | 36435.9 |
| leucine-rich repeat domain-containing protein | CC99x_012455 | Not Available | Negative | 2886708 - 2887886 | 46051.1 |
| dna helicase ii | CC99x_012460 | Not Available | Negative | 2888145 - 2890352 | 83543.2 |
| mfs transporter | CC99x_012465 | Not Available | Negative | 2890352 - 2891623 | 46618.8 |
| homogentisate 1,2-dioxygenase | CC99x_012470 | Not Available | Positive | 2891788 - 2893083 | 48522.5 |
| hu family dna-binding protein | CC99x_012475 | Not Available | Negative | 2893203 - 2893595 | 14575.3 |
| sos response-associated peptidase | CC99x_012480 | Not Available | Negative | 2893689 - 2894348 | 24838.2 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | CC99x_012485 | Not Available | Negative | 2894359 - 2896191 | 67174.3 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | CC99x_012490 | Not Available | Negative | 2896211 - 2897647 | 51830.3 |
| f0f1 atp synthase subunit epsilon | CC99x_012495 | Not Available | Negative | 2897762 - 2898190 | 15615.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.