Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein b | CC99x_012350 | Not Available | Positive | 2865255 - 2865758 | 18500.5 |
| sigma d regulator | CC99x_012355 | Not Available | Positive | 2866580 - 2867056 | 18217.9 |
| ferredoxin family protein | CC99x_012360 | Not Available | Negative | 2867053 - 2867376 | 12014.1 |
| hypothetical protein | CC99x_012365 | Not Available | Positive | 2867544 - 2868377 | 30578.2 |
| hypothetical protein | CC99x_012370 | Not Available | Negative | 2868502 - 2869092 | 22697.0 |
| d-2-hydroxyacid dehydrogenase | CC99x_012375 | Not Available | Negative | 2869089 - 2870048 | 35151.6 |
| hypothetical protein | CC99x_012380 | Not Available | Negative | 2870223 - 2870363 | 4972.53 |
| biosynthetic arginine decarboxylase | CC99x_012385 | Not Available | Negative | 2870463 - 2872364 | 71627.2 |
| polyamine aminopropyltransferase | CC99x_012390 | Not Available | Positive | 2872629 - 2873477 | 32199.6 |
| p-ii family nitrogen regulator | CC99x_012395 | Not Available | Negative | 2873466 - 2873804 | 12494.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.