Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin--nadp reductase | CC99x_012300 | Not Available | Negative | 2854564 - 2855313 | 28161.9 |
| hypothetical protein | CC99x_012305 | Not Available | Negative | 2855334 - 2856560 | 47437.1 |
| uroporphyrinogen-iii c-methyltransferase | CC99x_012310 | Not Available | Negative | 2856557 - 2858023 | 53608.3 |
| uroporphyrinogen-iii synthase | CC99x_012315 | Not Available | Negative | 2858203 - 2858985 | 29327.7 |
| hydroxymethylbilane synthase | CC99x_012320 | Not Available | Negative | 2858987 - 2859916 | 33830.3 |
| lyttr family dna-binding domain-containing protein | CC99x_012325 | Not Available | Negative | 2859999 - 2860748 | 28616.9 |
| histidine kinase | CC99x_012330 | Not Available | Negative | 2860783 - 2861847 | 39596.6 |
| dienelactone hydrolase family protein | CC99x_012335 | Not Available | Negative | 2862081 - 2862755 | 25188.6 |
| diaminopimelate decarboxylase | CC99x_012340 | Not Available | Positive | 2863056 - 2864300 | 46112.7 |
| diaminopimelate epimerase | CC99x_012345 | Not Available | Positive | 2864336 - 2865211 | 31952.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.