Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | CC99x_012250 | Not Available | Positive | 2843623 - 2845059 | 52464.4 |
| rna polymerase sigma factor rpoh | CC99x_012255 | Not Available | Negative | 2845294 - 2846160 | 32529.3 |
| hypothetical protein | CC99x_012260 | Not Available | Negative | 2846356 - 2847525 | 42496.8 |
| isoprenoid biosynthesis glyoxalase elbb | CC99x_012265 | Not Available | Negative | 2847692 - 2848342 | 23054.3 |
| sterol desaturase family protein | CC99x_012270 | Not Available | Negative | 2848373 - 2849236 | 34472.9 |
| thioredoxin trxa | CC99x_012275 | Not Available | Positive | 2849410 - 2849736 | 11821.1 |
| transcription termination factor rho | CC99x_012280 | Not Available | Positive | 2850000 - 2851259 | 46829.5 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | CC99x_012285 | Not Available | Positive | 2851271 - 2852737 | 54944.8 |
| hypothetical protein | CC99x_012290 | Not Available | Positive | 2852747 - 2853487 | 27978.9 |
| hypothetical protein | CC99x_012295 | Not Available | Negative | 2853503 - 2854342 | 31711.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.