Candidatus Berkiella cookevillensis

CoccusMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Candidatus Berkiellales

Family

Candidatus Berkiellaceae

Genus

Candidatus Berkiella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCandidatus Berkiellales
FamilyCandidatus Berkiellaceae
GenusCandidatus Berkiella
SpeciesCandidatus Berkiella cookevillensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbiofilm sample from a cooling tower
Biotic relationshipNot Available
Host(s)Amoeba, Acanthamoeba polyphaga
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Berkiella cookevillensis strain CC99 CC99_02, whole

Gene Summary

Adenine Count

924980 bp

Thymine Count

927602 bp

Guanine Count

565100 bp

Cytosine Count

567154 bp

Genome Length

2984836 bp

Protein-coding Genes

2513 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein mCC99x_012200Not AvailableNegative2834635 - 283522222343.6
hypothetical proteinCC99x_012205Not AvailableNegative2835233 - 283574519380.7
hypothetical proteinCC99x_012210Not AvailableNegative2835742 - 283669236413.5
l,d-transpeptidase family proteinCC99x_012215Not AvailablePositive2836907 - 283784534466.1
trna (cytidine(34)-2'-o)-methyltransferaseCC99x_012220Not AvailablePositive2837907 - 283836817167.7
nad(p)-dependent glycerol-3-phosphate dehydrogenaseCC99x_012225Not AvailableNegative2838566 - 283956735683.9
protein-export chaperone secbCC99x_012230Not AvailableNegative2839564 - 284004618087.6
rhodanese-like domain-containing proteinCC99x_012235Not AvailableNegative2840080 - 284054417632.7
2,3-bisphosphoglycerate-independent phosphoglycerate mutaseCC99x_012240Not AvailablePositive2840642 - 284217756148.1
peptidoglycan dd-metalloendopeptidase family proteinCC99x_012245Not AvailablePositive2842179 - 284333343823.5

Displaying genes 2431 – 2440 of 2571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.