Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--ammonia ligase | CC99x_012150 | Not Available | Positive | 2824943 - 2826358 | 52437.4 |
| duf4124 domain-containing protein | CC99x_012155 | Not Available | Positive | 2826606 - 2827157 | 20542.7 |
| hypothetical protein | CC99x_012160 | Not Available | Negative | 2827178 - 2828914 | 66304.3 |
| hypothetical protein | CC99x_012165 | Not Available | Negative | 2828979 - 2829419 | 16092.6 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CC99x_012170 | Not Available | Negative | 2829379 - 2830116 | 27899.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CC99x_012175 | Not Available | Negative | 2830106 - 2830567 | 17740.4 |
| hypothetical protein | CC99x_012180 | Not Available | Negative | 2830557 - 2831015 | 16937.5 |
| type ii secretion system gsph family protein | CC99x_012185 | Not Available | Negative | 2831044 - 2831583 | 19180.9 |
| type ii secretion system f family protein | CC99x_012190 | Not Available | Negative | 2831710 - 2832939 | 46544.6 |
| gspe/pule family protein | CC99x_012195 | Not Available | Negative | 2832896 - 2834638 | 65553.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.