Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_012100 | Not Available | Positive | 2814410 - 2816344 | 74651.9 |
| hit domain-containing protein | CC99x_012105 | Not Available | Positive | 2816419 - 2816754 | 12448.2 |
| twin-arginine translocase tata/tate family subunit | CC99x_012110 | Not Available | Positive | 2816803 - 2816970 | 5888.34 |
| hypothetical protein | CC99x_012115 | Not Available | Positive | 2816978 - 2817157 | 6477.28 |
| twin-arginine translocase subunit tatc | CC99x_012120 | Not Available | Positive | 2817162 - 2817887 | 27584.3 |
| hypothetical protein | CC99x_012125 | Not Available | Positive | 2818193 - 2821156 | 109699.0 |
| prolyl aminopeptidase | CC99x_012130 | Not Available | Negative | 2821380 - 2822330 | 36241.5 |
| hypothetical protein | CC99x_012135 | Not Available | Positive | 2822721 - 2823320 | 22408.2 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | CC99x_012140 | Not Available | Positive | 2823394 - 2824587 | 45467.8 |
| sulfurtransferase tusa family protein | CC99x_012145 | Not Available | Positive | 2824584 - 2824808 | 8514.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.