Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n' | CC99x_012050 | Not Available | Positive | 2796933 - 2798936 | 74786.5 |
| spor domain-containing protein | CC99x_012055 | Not Available | Positive | 2798975 - 2799787 | 29464.0 |
| atp-dependent protease subunit hslv | CC99x_012060 | Not Available | Positive | 2799915 - 2800457 | 19467.3 |
| atp-dependent protease atpase subunit hslu | CC99x_012065 | Not Available | Positive | 2800491 - 2801822 | 49969.3 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | CC99x_012070 | Not Available | Positive | 2801843 - 2802589 | 28238.1 |
| scp2 sterol-binding domain-containing protein | CC99x_012075 | Not Available | Positive | 2802589 - 2803209 | 23603.7 |
| ubiquinone biosynthesis regulatory protein kinase ubib | CC99x_012080 | Not Available | Positive | 2803209 - 2804858 | 63220.4 |
| hypothetical protein | CC99x_012085 | Not Available | Negative | 2805405 - 2809079 | 139503.0 |
| hypothetical protein | CC99x_012090 | Not Available | Negative | 2809455 - 2809985 | 18091.0 |
| hypothetical protein | CC99x_012095 | Not Available | Positive | 2810751 - 2814152 | 128242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.