Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | CC99x_012000 | Not Available | Positive | 2786900 - 2787622 | 27255.6 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | CC99x_012005 | Not Available | Negative | 2788117 - 2788932 | 30170.7 |
| adp compounds hydrolase nude | CC99x_012010 | Not Available | Negative | 2788929 - 2789525 | 22262.6 |
| hypothetical protein | CC99x_012015 | Not Available | Positive | 2789622 - 2790047 | 16317.7 |
| hypothetical protein | CC99x_012020 | Not Available | Negative | 2790125 - 2791549 | 53554.8 |
| phosphotransferase | CC99x_012025 | Not Available | Positive | 2791812 - 2792975 | 43899.7 |
| dethiobiotin synthase | CC99x_012030 | Not Available | Negative | 2792972 - 2793658 | 25260.7 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | CC99x_012035 | Not Available | Positive | 2793723 - 2794970 | 46269.2 |
| hypothetical protein | CC99x_012040 | Not Available | Positive | 2795035 - 2795706 | 25074.2 |
| hypothetical protein | CC99x_012045 | Not Available | Positive | 2795773 - 2796735 | 35862.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.